API

1. Please use this API to request the DNA methylation level of gene from ASMdb:

https://www.dna-asmdb.com/MethAelle/genemrAPI/?myorg=$species&geneid=$genename

ex: gene name ctcf , https://www.dna-asmdb.com/MethAelle/genemrAPI/?myorg=Homo_sapiens&geneid=CTCF or ensembl gene id ENSG00000102974 , https://www.dna-asmdb.com/MethAelle/genemrAPI/?myorg=Homo_sapiens&geneid=ENSG00000102974

The API needs two parameters:

  • species: please refer to here
  • genename

2. You also can use this API to request the DNA methylation level of gene without other information:

https://www.dna-asmdb.com/MethAelle/genemrplotAPI/?myorg=$species&geneid=$genename

ex: gene name ctcf , https://www.dna-asmdb.com/MethAelle/genemrplotAPI/?myorg=Homo_sapiens&geneid=CTCF or ensembl gene id ENSG00000102974 , https://www.dna-asmdb.com/MethAelle/genemrplotAPI/?myorg=Homo_sapiens&geneid=ENSG00000102974


3. You also can use this API to request the DNA methylation level boxplot between cancer and normal in gene body and promoter:

https://www.dna-asmdb.com/MethAelle/dmgenemrboxplot/?mytissue=$tissue&mysample1=$tumor&geneid=$genename

ex: gene name HOXA5 , https://www.dna-asmdb.com/MethAelle/dmgenemrboxplot/?mytissue=Lung&mysample1=cancer&geneid=HOXA5

The following are valid tissue and disease types

Blood Brain Breast Colon Liver Lung Pancreas Prostate Retina
  • ALL
  • AML3
  • CLL
  • colon-cancer
  • K562
  • lung-cancer
  • alzheimer
  • cancer
  • Schizo
  • cancer
  • cancer
  • cancer
  • cancer
  • cancer
  • cancer
  • tumor